Schedule
[this is work in progress]
Programs:
1genepop
10beast phylogeny (snapp)
9beast skyline
8migrate divergence/migration
4dadi
2structure
13fastsimcoal2
15angsd
5treemix
? plink
11refbayes
6tess
12IMa
7Eigensoft
week dates
1
8/24 Intro and organisation
8/26 Genepop/Isolation by distance/FST Scribe
8/28 Tutorial
2
8/31 Structure Scribe
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3
Labor day no class
9/9 Tutorial
9/11 Tutorial Report1
4
9/14 dadi Scribe
9/16 Tutorial
9/18 Tutorial Report2 Review1
5
9/21 treemix Scribe
9/23 Tutorial
9/25 Tutorial Report3 Review2
6
9/28 tess Scribe
9/30 Tutorial
10/2 Tutorial Report4 Review3
7
10/5 Eigensoft Scribe
10/7 Tutorial
10/9 Tutorial Report5 Review4
8
10/12 Migrate Scribe Review5
-- Self-tutorial
-- Self-tutorial All write a short report
9
-- Finish writing report
10/21 Migrate recap: Discussion about how to write a self-guided tutorial
10/23 Beast skyline Scribe
10
10/26 Tutorial
10/28 Beast SNAPP Scribe
10/30 Tutorial Report6
11
11/2 refbayes Scribe
11/4 Tutorial
11/6 Tutorial Report7 Review6
12
11/9 IMa Scribe
-- Self-tutorial
-- Compare to migrate using a simulated dataset
13
-- ALL: write a short report abot the migrate-ima comparison
11/18 fastsimcoal2 Scribe
11/20 Tutorial
14
11/23 Tutorial Report8 Review7
Thanksgiving
Thanksgiving
15
11/30 angsd Scribe Review8
12/2 Tutorial
12/4 Tutorial
finals week
