Peter Beerli's Classes

Schedule

• Week 1
  • 8/24 Intro and organisation
  • 8/26 Genepop/Isolation by distance/FST, short introduction about the methods and tutorial

• Week 2
  • 8/31 Structure and Structurama
  • [out of town] Read up about the methods

• Week 3
  • 9/7 Labor day no class
  • 9/9 Tutorial of Structure

• Week 4
  • 9/14 dadi and eigensoft
  • 9/16 Tutorial on dadi

• Week 5
  • 9/21 treemix
  • 9/23 Tutorial

• Week 6
  • 9/28 BAPS, TESS, Geneland
  • 9/30 Tutorial

• Week 7
  • 10/5 Sate, Pasta, ...
  • 10/7 Tutorial

• Week 8
  • 10/12 Rev-Bayes
  • 10/14 Tutorial

• Week 9
  • 10/19 [out of town] Read articles about BEAST
  • 10/21 BEAST Skyline (single locus) Methods and Tutorial

• Week 10
  • 10/26 Beast SNAPP and SVDquartet
  • 10/28 Tutorial

• Week 11
  • 11/2 IMa
  • 11/4 Tutorial of IMa

• Week 12
  • 11/9 Migrate
  • 11/11 [out of town] Run the Migrate tutorial (we want to write a report that compares migrate and IMa results)

• Week 13
  • 11/16 [out of town] write a short report about the migrate-ima comparison
  • 11/18 fastsimcoal2, method and tutorial

• Week 14
  • 11/23 Discussion about ABC methods on general (fastsimcoal2 msBayes etc)
  • 11/25 Thanksgiving Holiday

• Week 15
  • 11/30 angsd
  • 12/2 Tutorial for angsd