Networks in Epidemiology
Haleh Askhi developed simulation methods for dynamic networks in epidemics that allows fast simulations of epidemics on complex, changing contact networks. Manuscript is on the last 10% stretch.
Current work snippets.
Estimation of contact networks using HMM
Haleh Ashki developed a method to use the genetic information of the pathogen to select among candidate contact networks of the host. Manuscript almost finished.
Taking into account sequencing error
Kyle Shaw extended currently work of Justin Bricker integrating sequencing errors with the Poisson-indel process.
New divergence estimation method
Download Migrate 4.4.3 and test for yourself and see manuscript on biorxiv.org
